Geneious offers a fully functional . This isn’t a stripped-down version; it is the complete Prime suite. If you have a specific project or a deadline, this is the safest way to get the job done.
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| Feature | Open-Source Alternative | |---------|-------------------------| | Sequence alignment | MEGA (graphical), MAFFT/Clustal Omega (command-line) | | Phylogenetic trees | MEGA, IQ-TREE, RAxML | | Primer design | Primer3 (web or local), PrimerMap | | Sanger trace analysis | FinchTV, Chromas (free version) | | Sequence editing | ApE (A plasmid Editor), UGENE | | Whole-genome alignment | Mauve, progressiveMauve | Geneious offers a fully functional